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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs68023324 chr11:93643495 TCAA/T 0.00024 487 15.15 18.05 16.63 KM Plot
THCA rs68108692 chr2:224612083 AAAT/A 0.000105 473 16.07 16.48 15.33 KM Plot
THCA rs68130131 chr1:184127404 G/T 4.55E-15 485 15.47 17.98 12.53 KM Plot
THCA rs6814276 chr4:1057453 A/G 2.37E-5 486 15.9 15.3 9.85 KM Plot
THCA rs6817989 chr4:1054807 C/A 2.37E-5 486 15.9 15.3 9.85 KM Plot
THCA rs6819202 chr4:3368264 G/A 1.47E-5 479 12.07 15.27 16.83 KM Plot
THCA rs6822415 chr4:161768930 A/G 2.37E-5 490 15.77 16.8 34.1 KM Plot
THCA rs6825615 chr4:115653377 C/T 1.37E-7 481 15.9 15.9 5.8 KM Plot
THCA rs6844859 chr4:3190486 T/C 0.000162 482 17.13 14.47 14.77 KM Plot
THCA rs6852246 chr4:1052556 C/A 2.37E-5 486 15.9 15.3 9.85 KM Plot
THCA rs6855981 chr4:3148276 A/G 8.79E-6 490 14.93 14.47 16.95 KM Plot
THCA rs6861666 chr5:96205801 A/G 3.31E-6 487 15.17 16.9 20.83 KM Plot
THCA rs6866020 chr5:96205765 T/G 3.31E-6 487 15.17 16.9 20.83 KM Plot
THCA rs6873990 chr5:96201080 A/G 3.25E-6 488 15.2 16.9 20.83 KM Plot
THCA rs6900646 chr6:24457566 G/A 2.62E-7 485 16.33 15.73 7.43 KM Plot